Presence and absence of COG 4251 with function Bacteriophytochrome (light-regulated signal transduction histidine kinase) within a set of Prochlorococcus genomes

Presence and absence of COG 4251 with function Bacteriophytochrome (light-regulated signal transduction histidine kinase) within a set of Prochlorococcus genomes

Usage

light_presence

Format

A data frame object with 31 observations of 5 covariates.

sample

Sample id

cog

COG, all observations are from COG 4251

presence

1 if COG 4251 is present in the sample, 0 otherwise

clade

light level, combined with category I or II

light

HL for high light condition, LL for low light condition

References

https://statdivlab.github.io/blog/articles/ebame10_regression_pt2.html